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Commit
17341a5c
authored
Mar 31, 2015
by
Tobias Fuchs
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Merge branch 'embb392_partitioner' into development
parents
52a5d250
1b725190
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4 changed files
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174 additions
and
107 deletions
+174
-107
algorithms_cpp/include/embb/algorithms/internal/partition-inl.h
+68
-73
algorithms_cpp/include/embb/algorithms/internal/partition.h
+31
-31
algorithms_cpp/test/partitioner_test.cc
+68
-3
algorithms_cpp/test/partitioner_test.h
+7
-0
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algorithms_cpp/include/embb/algorithms/internal/partition-inl.h
View file @
17341a5c
...
...
@@ -31,109 +31,104 @@ namespace embb {
namespace
algorithms
{
namespace
internal
{
template
<
typename
ForwardIterator
>
ChunkDescriptor
<
ForwardIterator
>::
ChunkDescriptor
(
ForwardIterator
first
,
ForwardIterator
last
)
:
first
(
first
),
last
(
last
)
{
template
<
typename
RAI
>
ChunkDescriptor
<
RAI
>::
ChunkDescriptor
(
RAI
first
,
RAI
last
)
:
first_
(
first
),
last_
(
last
)
{
}
template
<
typename
ForwardIterator
>
ForwardIterator
ChunkDescriptor
<
ForwardIterator
>::
GetFirst
()
const
{
return
first
;
template
<
typename
RAI
>
RAI
ChunkDescriptor
<
RAI
>::
GetFirst
()
const
{
return
first
_
;
}
template
<
typename
ForwardIterator
>
ForwardIterator
ChunkDescriptor
<
ForwardIterator
>::
GetLast
()
const
{
return
last
;
template
<
typename
RAI
>
RAI
ChunkDescriptor
<
RAI
>::
GetLast
()
const
{
return
last
_
;
}
template
<
typename
ForwardIterator
>
BlockSizePartitioner
<
ForwardIterator
>::
BlockSizePartitioner
(
ForwardIterator
first
,
ForwardIterator
last
,
size_t
chunkSize
)
:
first
(
first
),
last
(
last
),
chunkSize
(
chunkSize
)
{
elements_count
=
static_cast
<
size_t
>
(
std
::
distance
(
first
,
last
));
chunks
=
elements_count
/
chunkSize
;
if
(
elements_count
%
chunkSize
!=
0
)
chunks
++
;
template
<
typename
RAI
>
BlockSizePartitioner
<
RAI
>::
BlockSizePartitioner
(
RAI
first
,
RAI
last
,
size_t
chunkSize
)
:
first_
(
first
),
last_
(
last
),
chunk_size_
(
chunkSize
)
{
elements_count_
=
static_cast
<
size_t
>
(
std
::
distance
(
first_
,
last_
));
chunks_
=
elements_count_
/
chunk_size_
;
if
(
elements_count_
%
chunk_size_
!=
0
)
{
chunks_
++
;
}
}
template
<
typename
ForwardIterator
>
size_t
BlockSizePartitioner
<
ForwardIterator
>::
Size
()
{
return
chunks
;
template
<
typename
RAI
>
size_t
BlockSizePartitioner
<
RAI
>::
Size
()
{
return
chunks
_
;
}
template
<
typename
ForwardIterator
>
const
ChunkDescriptor
<
ForwardIterator
>
BlockSizePartitioner
<
ForwardIterator
>::
operator
[](
size_t
const
&
index
)
const
{
ForwardIterator
first_new
=
first
;
std
::
advance
(
first_new
,
index
*
chunkSize
)
;
ForwardIterator
last_new
=
first_new
;
if
(
index
>=
chunks
-
1
)
{
last_new
=
last
;
template
<
typename
RAI
>
const
ChunkDescriptor
<
RAI
>
BlockSizePartitioner
<
RAI
>::
operator
[](
size_t
const
&
index
)
const
{
typedef
typename
std
::
iterator_traits
<
RAI
>::
difference_type
difference_type
;
RAI
first_new
(
first_
);
first_new
+=
static_cast
<
difference_type
>
(
chunk_size_
*
index
)
;
RAI
last_new
(
first_new
);
if
(
index
>=
chunks
_
-
1
)
{
last_new
=
last
_
;
}
else
{
std
::
advance
(
last_new
,
chunkSize
);
last_new
+=
static_cast
<
difference_type
>
(
chunk_size_
);
}
return
ChunkDescriptor
<
ForwardIterator
>
(
first_new
,
last_new
);
return
ChunkDescriptor
<
RAI
>
(
first_new
,
last_new
);
}
template
<
typename
ForwardIterator
>
size_t
ChunkPartitioner
<
ForwardIterator
>::
Size
()
{
return
size
;
template
<
typename
RAI
>
size_t
ChunkPartitioner
<
RAI
>::
Size
()
{
return
size
_
;
}
template
<
typename
ForwardIterator
>
ChunkPartitioner
<
ForwardIterator
>::
ChunkPartitioner
(
ForwardIterator
first
,
ForwardIterator
last
,
size_t
amountChunks
)
:
first
(
first
),
last
(
last
)
{
template
<
typename
RAI
>
ChunkPartitioner
<
RAI
>::
ChunkPartitioner
(
RAI
first
,
RAI
last
,
size_t
amountChunks
)
:
first_
(
first
),
last_
(
last
)
{
if
(
amountChunks
>
0
)
{
size
=
amountChunks
;
size
_
=
amountChunks
;
}
else
{
// if no concrete chunk size was given, use number of cores
...
// if no concrete chunk size was given, use number of cores
embb
::
tasks
::
Node
&
node
=
embb
::
tasks
::
Node
::
GetInstance
();
size
=
node
.
GetWorkerThreadCount
();
size
_
=
node
.
GetWorkerThreadCount
();
}
elements_count
=
static_cast
<
size_t
>
(
std
::
distance
(
first
,
last
));
if
(
size
>
elements_count
)
{
elements_count_
=
static_cast
<
size_t
>
(
std
::
distance
(
first_
,
last_
));
if
(
size_
>
elements_count_
)
{
// if we want to make more chunks than we have elements, correct
// the number of chunks
size
=
elements_count
;
size
_
=
elements_count_
;
}
standard_chunk_size
=
elements_count
/
size
;
bigger_chunk_count
=
elements_count
%
size
;
standard_chunk_size
_
=
elements_count_
/
size_
;
bigger_chunk_count
_
=
elements_count_
%
size_
;
}
template
<
typename
ForwardIterator
>
const
ChunkDescriptor
<
ForwardIterator
>
ChunkPartitioner
<
ForwardIterator
>::
operator
[](
template
<
typename
RAI
>
const
ChunkDescriptor
<
RAI
>
ChunkPartitioner
<
RAI
>::
operator
[](
size_t
const
&
index
)
const
{
typedef
typename
std
::
iterator_traits
<
ForwardIterator
>::
difference_type
typedef
typename
std
::
iterator_traits
<
RAI
>::
difference_type
difference_type
;
// Number of element preceding elements in the given chunk
size_t
prec_elements_count
=
0
;
if
(
index
<=
bigger_chunk_count
)
{
prec_elements_count
=
index
*
(
standard_chunk_size
+
1
);
if
(
index
<=
bigger_chunk_count_
)
{
prec_elements_count
=
index
*
(
standard_chunk_size_
+
1
);
}
else
{
prec_elements_count
=
(
standard_chunk_size
+
1
)
*
bigger_chunk_count
+
standard_chunk_size
*
(
index
-
bigger_chunk_count
);
prec_elements_count
=
(
standard_chunk_size_
+
1
)
*
bigger_chunk_count_
+
(
standard_chunk_size_
*
(
index
-
bigger_chunk_count_
));
}
size_t
cur_elements_count
=
(
index
<
bigger_chunk_count
)
?
(
standard_chunk_size
+
1
)
:
standard_chunk_size
;
ForwardIterator
first_new
=
first
;
std
::
advance
(
first_new
,
prec_elements_count
);
first_new
=
first
+
static_cast
<
difference_type
>
(
prec_elements_count
);
ForwardIterator
last_new
=
first_new
;
std
::
advance
(
last_new
,
cur_elements_count
);
return
ChunkDescriptor
<
ForwardIterator
>
(
first_new
,
last_new
);
size_t
cur_elements_count
=
(
index
<
bigger_chunk_count_
)
?
(
standard_chunk_size_
+
1
)
:
standard_chunk_size_
;
RAI
first_new
(
first_
);
first_new
+=
static_cast
<
difference_type
>
(
prec_elements_count
);
RAI
last_new
(
first_new
);
last_new
+=
static_cast
<
difference_type
>
(
cur_elements_count
);
return
ChunkDescriptor
<
RAI
>
(
first_new
,
last_new
);
}
}
// namespace internal
...
...
algorithms_cpp/include/embb/algorithms/internal/partition.h
View file @
17341a5c
...
...
@@ -38,14 +38,14 @@ namespace internal {
* Describes a single partition of a 1-dimensional
* partitioning, using first and last iterator.
*
* \tparam
ForwardIterator
Type of the iterator.
* \tparam
RAI
Type of the iterator.
*/
template
<
typename
ForwardIterator
>
template
<
typename
RAI
>
class
ChunkDescriptor
{
private
:
ForwardIterator
first
;
ForwardIterator
last
;
RAI
first_
;
RAI
last_
;
public
:
/**
...
...
@@ -54,7 +54,7 @@ class ChunkDescriptor {
* \param first The first iterator.
* \param last The last iterator
*/
ChunkDescriptor
(
ForwardIterator
first
,
ForwardIterator
last
);
ChunkDescriptor
(
RAI
first
,
RAI
last
);
/**
* Gets the first iterator.
...
...
@@ -63,7 +63,7 @@ class ChunkDescriptor {
*
* \waitfree
*/
ForwardIterator
GetFirst
()
const
;
RAI
GetFirst
()
const
;
/**
* Gets the last iterator.
...
...
@@ -72,7 +72,7 @@ class ChunkDescriptor {
*
* \waitfree
*/
ForwardIterator
GetLast
()
const
;
RAI
GetLast
()
const
;
};
/**
...
...
@@ -80,9 +80,9 @@ class ChunkDescriptor {
*
* Describes the interface for accessing a 1-dimensional partitioning.
*
* \tparam
ForwardIterator
Type of the iterator.
* \tparam
RAI
Type of the iterator.
*/
template
<
typename
ForwardIterator
>
template
<
typename
RAI
>
class
IPartitioner
{
public
:
virtual
~
IPartitioner
()
{}
...
...
@@ -106,7 +106,7 @@ class IPartitioner {
*
* \waitfree
*/
virtual
const
ChunkDescriptor
<
ForwardIterator
>
operator
[](
virtual
const
ChunkDescriptor
<
RAI
>
operator
[](
size_t
const
&
index
)
const
=
0
;
};
...
...
@@ -129,16 +129,16 @@ class IPartitioner {
* 2: [6,7,8,9,10]
* 3: [11,12,13]
*
* \tparam
ForwardIterator
Type of the iterator.
* \tparam
RAI
Type of the iterator.
*/
template
<
typename
ForwardIterator
>
class
BlockSizePartitioner
:
IPartitioner
<
ForwardIterator
>
{
template
<
typename
RAI
>
class
BlockSizePartitioner
:
IPartitioner
<
RAI
>
{
private
:
ForwardIterator
first
;
ForwardIterator
last
;
size_t
chunk
Size
;
size_t
elements_count
;
size_t
chunks
;
RAI
first_
;
RAI
last_
;
size_t
chunk
_size_
;
size_t
elements_count
_
;
size_t
chunks
_
;
public
:
/**
...
...
@@ -150,7 +150,7 @@ class BlockSizePartitioner : IPartitioner < ForwardIterator > {
* \param chunkSize (Optional) size of the chunk.
*/
BlockSizePartitioner
(
ForwardIterator
first
,
ForwardIterator
last
,
size_t
chunkSize
=
1
);
RAI
first
,
RAI
last
,
size_t
chunkSize
=
1
);
/**
* See IPartitioner
...
...
@@ -164,7 +164,7 @@ class BlockSizePartitioner : IPartitioner < ForwardIterator > {
*
* \waitfree
*/
virtual
const
ChunkDescriptor
<
ForwardIterator
>
operator
[](
virtual
const
ChunkDescriptor
<
RAI
>
operator
[](
size_t
const
&
index
)
const
;
};
...
...
@@ -196,17 +196,17 @@ class BlockSizePartitioner : IPartitioner < ForwardIterator > {
* 4: [10,11]
* 5: [12,13]
*
* \tparam
ForwardIterator
Type of the iterator.
* \tparam
RAI
Type of the iterator.
*/
template
<
typename
ForwardIterator
>
class
ChunkPartitioner
:
IPartitioner
<
ForwardIterator
>
{
template
<
typename
RAI
>
class
ChunkPartitioner
:
IPartitioner
<
RAI
>
{
private
:
size_t
size
;
size_t
elements_count
;
ForwardIterator
first
;
ForwardIterator
last
;
size_t
standard_chunk_size
;
size_t
bigger_chunk_count
;
size_t
size
_
;
size_t
elements_count
_
;
RAI
first_
;
RAI
last_
;
size_t
standard_chunk_size
_
;
size_t
bigger_chunk_count
_
;
public
:
/**
...
...
@@ -227,7 +227,7 @@ class ChunkPartitioner : IPartitioner < ForwardIterator > {
* \param last The last.
* \param amountChunks (Optional) the amount chunks.
*/
ChunkPartitioner
(
ForwardIterator
first
,
ForwardIterator
last
,
ChunkPartitioner
(
RAI
first
,
RAI
last
,
size_t
amountChunks
=
0
);
/**
...
...
@@ -235,7 +235,7 @@ class ChunkPartitioner : IPartitioner < ForwardIterator > {
*
* \waitfree
*/
virtual
const
ChunkDescriptor
<
ForwardIterator
>
operator
[](
virtual
const
ChunkDescriptor
<
RAI
>
operator
[](
size_t
const
&
index
)
const
;
};
...
...
algorithms_cpp/test/partitioner_test.cc
View file @
17341a5c
...
...
@@ -33,9 +33,15 @@
#include <vector>
#include <list>
PartitionerTest
::
PartitionerTest
()
{
CreateUnit
(
"algorithms partitioner test"
).
Add
(
&
PartitionerTest
::
TestBasic
,
this
);
PartitionerTest
::
PartitionerTest
()
:
partitioned_array_size_
(
16384
)
{
// Size of array to be partitioned should be power of 2
CreateUnit
(
"TestBasic"
)
.
Add
(
&
PartitionerTest
::
TestBasic
,
this
);
CreateUnit
(
"TestLargeRange"
)
.
Pre
(
&
PartitionerTest
::
TestLargeRangePre
,
this
)
.
Add
(
&
PartitionerTest
::
TestLargeRange
,
this
)
.
Post
(
&
PartitionerTest
::
TestLargeRangePost
,
this
);
}
void
PartitionerTest
::
TestBasic
()
{
...
...
@@ -70,3 +76,62 @@ void PartitionerTest::TestBasic() {
PT_EXPECT_EQ_MSG
(
partitioner2
.
Size
(),
size_t
(
3
),
"Check count of partitions"
);
}
void
PartitionerTest
::
TestLargeRangePre
()
{
partitioned_array_
=
new
int
[
partitioned_array_size_
];
for
(
size_t
i
=
0
;
i
<
partitioned_array_size_
;
++
i
)
{
partitioned_array_
[
i
]
=
static_cast
<
int
>
(
i
);
}
}
void
PartitionerTest
::
TestLargeRangePost
()
{
delete
[]
partitioned_array_
;
}
void
PartitionerTest
::
TestLargeRange
()
{
// Test chunk partitioner with increasing number of chunks:
for
(
size_t
num_chunks
=
2
;
num_chunks
<
partitioned_array_size_
;
num_chunks
*=
2
)
{
embb
::
algorithms
::
internal
::
ChunkPartitioner
<
int
*>
chunk_partitioner
(
partitioned_array_
,
partitioned_array_
+
partitioned_array_size_
,
num_chunks
);
int
last_value_prev
=
-
1
;
PT_EXPECT_EQ
(
num_chunks
,
chunk_partitioner
.
Size
());
// Iterate over chunks in partition:
for
(
size_t
chunk
=
0
;
chunk
<
chunk_partitioner
.
Size
();
++
chunk
)
{
int
first_value
=
*
(
chunk_partitioner
[
chunk
].
GetFirst
());
int
last_value
=
*
(
chunk_partitioner
[
chunk
].
GetLast
()
-
1
);
PT_EXPECT_LT
(
first_value
,
last_value
);
// Test seams between chunks: chunk[i].last + 1 == chunk[i+1].first
PT_EXPECT_EQ
((
last_value_prev
+
1
),
first_value
);
last_value_prev
=
last_value
;
}
}
// Test block size partitioner with increasing chunk size:
for
(
size_t
block_size
=
1
;
block_size
<
partitioned_array_size_
;
block_size
*=
2
)
{
embb
::
algorithms
::
internal
::
BlockSizePartitioner
<
int
*>
chunk_partitioner
(
partitioned_array_
,
partitioned_array_
+
partitioned_array_size_
,
block_size
);
int
last_value_prev
=
-
1
;
// Iterate over chunks in partition:
for
(
size_t
chunk
=
0
;
chunk
<
chunk_partitioner
.
Size
();
++
chunk
)
{
int
first_value
=
*
(
chunk_partitioner
[
chunk
].
GetFirst
());
int
last_value
=
*
(
chunk_partitioner
[
chunk
].
GetLast
()
-
1
);
if
(
block_size
==
1
)
{
PT_EXPECT_EQ
(
first_value
,
last_value
);
}
else
{
PT_EXPECT_LT
(
first_value
,
last_value
);
}
// Test seams between chunks: chunk[i].last + 1 == chunk[i+1].first
PT_EXPECT_EQ
((
last_value_prev
+
1
),
first_value
);
last_value_prev
=
last_value
;
}
}
}
algorithms_cpp/test/partitioner_test.h
View file @
17341a5c
...
...
@@ -35,6 +35,13 @@ class PartitionerTest : public partest::TestCase {
private
:
void
TestBasic
();
void
TestLargeRangePre
();
void
TestLargeRangePost
();
void
TestLargeRange
();
int
*
partitioned_array_
;
size_t
partitioned_array_size_
;
};
#endif // ALGORITHMS_CPP_TEST_PARTITIONER_TEST_H_
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